CDS

Accession Number TCMCG015C59116
gbkey CDS
Protein Id XP_027093393.1
Location complement(join(4153805..4153854,4154839..4154916,4155005..4155112,4155594..4155717,4155886..4156003,4157024..4157154,4157261..4157321,4158142..4158235,4158555..4158642,4159249..4159362,4160108..4160153,4160617..4160689,4161063..4161165,4161274..4161333,4161430..4161513))
Gene LOC113713802
GeneID 113713802
Organism Coffea arabica

Protein

Length 443aa
Molecule type protein
Topology linear
Data_file_division PLN
dblink BioProject:PRJNA506972
db_source XM_027237592.1
Definition tRNA pseudouridine(38/39) synthase-like [Coffea arabica]

EGGNOG-MAPPER Annotation

COG_category J
Description synthase
KEGG_TC -
KEGG_Module -
KEGG_Reaction -
KEGG_rclass -
BRITE ko00000        [VIEW IN KEGG]
ko01000        [VIEW IN KEGG]
ko03016        [VIEW IN KEGG]
KEGG_ko ko:K01855        [VIEW IN KEGG]
EC 5.4.99.45        [VIEW IN KEGG]        [VIEW IN INGREDIENT]
KEGG_Pathway -
GOs GO:0001522        [VIEW IN EMBL-EBI]
GO:0003674        [VIEW IN EMBL-EBI]
GO:0003824        [VIEW IN EMBL-EBI]
GO:0005575        [VIEW IN EMBL-EBI]
GO:0005622        [VIEW IN EMBL-EBI]
GO:0005623        [VIEW IN EMBL-EBI]
GO:0005634        [VIEW IN EMBL-EBI]
GO:0005737        [VIEW IN EMBL-EBI]
GO:0006139        [VIEW IN EMBL-EBI]
GO:0006396        [VIEW IN EMBL-EBI]
GO:0006399        [VIEW IN EMBL-EBI]
GO:0006400        [VIEW IN EMBL-EBI]
GO:0006725        [VIEW IN EMBL-EBI]
GO:0006807        [VIEW IN EMBL-EBI]
GO:0008033        [VIEW IN EMBL-EBI]
GO:0008150        [VIEW IN EMBL-EBI]
GO:0008152        [VIEW IN EMBL-EBI]
GO:0009451        [VIEW IN EMBL-EBI]
GO:0009982        [VIEW IN EMBL-EBI]
GO:0009987        [VIEW IN EMBL-EBI]
GO:0010467        [VIEW IN EMBL-EBI]
GO:0016070        [VIEW IN EMBL-EBI]
GO:0016071        [VIEW IN EMBL-EBI]
GO:0016556        [VIEW IN EMBL-EBI]
GO:0016853        [VIEW IN EMBL-EBI]
GO:0016866        [VIEW IN EMBL-EBI]
GO:0031119        [VIEW IN EMBL-EBI]
GO:0034470        [VIEW IN EMBL-EBI]
GO:0034641        [VIEW IN EMBL-EBI]
GO:0034660        [VIEW IN EMBL-EBI]
GO:0043170        [VIEW IN EMBL-EBI]
GO:0043226        [VIEW IN EMBL-EBI]
GO:0043227        [VIEW IN EMBL-EBI]
GO:0043229        [VIEW IN EMBL-EBI]
GO:0043231        [VIEW IN EMBL-EBI]
GO:0043412        [VIEW IN EMBL-EBI]
GO:0044237        [VIEW IN EMBL-EBI]
GO:0044238        [VIEW IN EMBL-EBI]
GO:0044424        [VIEW IN EMBL-EBI]
GO:0044464        [VIEW IN EMBL-EBI]
GO:0046483        [VIEW IN EMBL-EBI]
GO:0071704        [VIEW IN EMBL-EBI]
GO:0090304        [VIEW IN EMBL-EBI]
GO:1901360        [VIEW IN EMBL-EBI]
GO:1990481        [VIEW IN EMBL-EBI]

Sequence

CDS:  
ATGGATCTCGCAAACTCCGACTCCGATGTGGACCTCATCAGCTCTCTACAAGCACAGCTCCACTCTCTCCAGAAAAGAGTCAAGGAGTTAGAATCAGAAAAGGCTAAGTTGTCGTCATTGCTATCAAATTGCCATTGTCAAAAGGGGAAGGAAAATGTTAGTGCCAGTGCTGTAGCTGAGGAGTTAGAGGAATTAAAAATAGAGGGTGACTTGGCAACCTACAAAGGGGGAACGAAGAAAGATTCAGGTCCCCAGACAAGTGGTGTGCGTCAATTCCCCAGGAGATATGTTGCTTTAAAAGTTATGTACTTCGGTCAGAGGTTTTATGGTTTTGCTTCAGAGGCACACATGGATCCAACTGTGGAGTCGGAAATTTTTAGAGCTCTTAAGAAGACAAAGCTCATTGATAGAGTAGACAAGAAGGGACTACAATACTCAAGATGCGGTAGAACAGACAAAGGAGTTTCTTCTACTGGGCAAGTAATTGCTCTGTTTTTACGGTCAAACCTGAAGCAAACAAGAGGGAACACTGAATATGCTGGAGATATTTGGCCGGAAGAATCATGTGGAGAAATGGACTATGTTGGCATGATTAATAAAGTCCTTCCAAAAGATATTCAAGTTATGGGTTGGTCTCCTGCTCCAGTTGATTTCAGTGCAAGGTTCAGCTGTTTAAGTAGACAATATAAGTACTTCTTTTGGAGGGATAATCTTAATATAATGGCAATGGAGACTGCTGGGAAGAAATTTCTTGGTGAGCATGATTTCCGAAACTTTTGCAAGATGGATGCCATTAATGTACACAATTTCAGACGTTGCATCACGCTATTTGAGATTTCCCATTGCAGTGAAAGTTTTGAGGACAATGAACTCTGGGCGATAAAAATTAAAGGTAGTGCTTTCCTGTGGCACCAAATCCGATGCATGGCTGCTCTACTATTTCTGATCGGAGAAGGCCTTGAAACTCCTAATGTTATAGATTTATTACTTGATATTGAGAAGACAACAAGGAAACCTCAATACACAATGGCTTCGGAAATTCCACTAGTTCTTCAATCTTGTGAATTTGAAGGTCTTAGATTCATTTGTTCATCAGGTGCTAAACAAGCTTTGGATGAGCACTTGAAGAAGGAATGCCTTAATTACAAGCTTCAAGCTGCAATATATGATGAGGCTTTACAGAGCTGTTCCCTTATTGAAACTGATGACAGTTTGCTGAATAATGTTAGATTGAAACATAGGAAAGCTGTCTATGTTCCCATCATGTCAAGGCCCACCGAACCTTCCTATGAAGAGCGGCGTGCTAAATTTAGCACTGCAGGTAAAACATGA
Protein:  
MDLANSDSDVDLISSLQAQLHSLQKRVKELESEKAKLSSLLSNCHCQKGKENVSASAVAEELEELKIEGDLATYKGGTKKDSGPQTSGVRQFPRRYVALKVMYFGQRFYGFASEAHMDPTVESEIFRALKKTKLIDRVDKKGLQYSRCGRTDKGVSSTGQVIALFLRSNLKQTRGNTEYAGDIWPEESCGEMDYVGMINKVLPKDIQVMGWSPAPVDFSARFSCLSRQYKYFFWRDNLNIMAMETAGKKFLGEHDFRNFCKMDAINVHNFRRCITLFEISHCSESFEDNELWAIKIKGSAFLWHQIRCMAALLFLIGEGLETPNVIDLLLDIEKTTRKPQYTMASEIPLVLQSCEFEGLRFICSSGAKQALDEHLKKECLNYKLQAAIYDEALQSCSLIETDDSLLNNVRLKHRKAVYVPIMSRPTEPSYEERRAKFSTAGKT